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Neuronally produced betaine acts via a ligand-gated ion channel to control behavioral states
2022.
Hardege, I., Morud, J., Yu, J., Wilson, T.S., Schroeder, Frank C, Schafer, W.R.
Proc Natl Acad Sci U S A.
119
:
e2201783119
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Metagenomic identification of novel viruses of maize and teosinte in North America
2022.
Lappe, R.R., Elmore, M.G., Lozier, Z.R., Jander, Georg, Miller, W.A., Whitham, S.A.
BMC Genomics.
23
:
767
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A Medicago truncatula Cell Biology Resource: Transgenic Lines Expressing Fluorescent Protein-Based Markers of Membranes, Organelles, and Subcellular Compartments.
2022.
Ivanov, S., Daniels, D.A., Harrison, Maria J.
Mol Plant Microbe Interact..
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Tree tobacco (Nicotiana glauca) cuticular wax composition is essential for leaf retention during drought, facilitating a speedy recovery following rewatering.
2022.
Negin, B., Hen-Avivi, S., Almekias-Siegl, E., Shachar, L., Jander, Georg, Aharoni, A.
New Phytol..
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A family of methyl esterases converts methyl salicylate to salicylic acid in ripening tomato fruit.
2022.
Frick, E.M., Sapkota, M., Pereira Garcia, L., Wang, Y., Hermanns, A., Giovannoni, James J., van der Knaap, E., Tieman, D.M., Klee, H.J.
Plant Physiol..
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Inulin fibre promotes microbiota-derived bile acids and type 2 inflammation.
2022.
Arifuzzaman, M., Won, T.H., Li, T.T., Yano, H., Digumarthi, S., Heras, A.F., Zhang, W., Parkhurst, C.N., Kashyap, S., Jin, W.B., Putzel, G.G., Tsou, A.M., Chu, C., Wei, Q., Grier, A., JRI IBD Live Cell Bank Consortium, Worgall, S., Guo, C.J., Schroeder, Frank C., Artis, D.
Nature.
611
:
578–584
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CuGenDBv2: an updated database for cucurbit genomics.
2022.
Yu, J., Wu, S., Sun, H., Wang, X., Tang, X., Guo, S., Zhang, Z., Huang, S., Xu, Y., Weng, Y., Mazourek, M., McGregor, C., Renner, S.S., Branham, S., Kousik, C., Wechter, W.P., Levi, A., Grumet, R., Zheng, Y., Fei, Zhangjun
Nucleic Acids Res..
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Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids.
2022.
Schiltz, C.J., Wilson, J.R., Hosford, C.J., Adams, M.C., Preising, S.E., DeBlasio, S.L., MacLeod, H.J., Van Eck, Joyce, Heck, M.L., Chappie, J.S.
Nat Commun..
13
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6368
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Rewiring of the protein-protein-metabolite interactome during the diauxic shift in yeast.
2022.
Schlossarek, D., Luzarowski, M., Sokołowska, E.M., Thirumalaikumar, V.P., Dengler, L., Willmitzer, L., Ewald, J.C., Skirycz, Aleksandra
Cell Mol Life Sci..
79
:
550
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Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome.
2022.
He, J., Alonge, M., Ramakrishnan, S., Benoit, M., Soyk, S., Reem, N.T., Hendelman, A., Van Eck, Joyce, Schatz, M.C., Lippman, Z.B.
Plant Cell..
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Parallel pathways for serotonin biosynthesis and metabolism in C. elegans.
2022.
Yu, J., Vogt, M.C., Fox, B.W., Wrobel, C.J.J., Fajardo Palomino, D., Curtis, B.J., Zhang, B., Le, H.H., Tauffenberger, A., Hobert, O., Schroeder, Frank C.
Nat Chem Biol..
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Evolutionary analysis of the LORELEI gene family in plants reveals regulatory subfunctionalization.
2022.
Noble, J.A., Bielski, N.V., Liu, M.J., DeFalco, T.A., Stegmann, M., Nelson, Andrew D.L., McNamara, K., Sullivan, B., Dinh, K.K., Khuu, N., Hancock, S., Shiu, S.H., Zipfel, C., Cheung, A.Y., Beilstein, M.A., Palanivelu, R.
Plant Physiol..
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kiac444
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Re-evaluating the Systematics of Dendrolycopodium Using Restriction-Site Associated DNA-Sequencing.
2022.
Petlewski, A.R., Hauser, D.A., Kim, M., Schmutz, J., Grimwood, J., Li, Fay-Wei
Front Plant Sci..
13
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912080
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Loss of function of the bHLH transcription factor Nrd1 in tomato enhances resistance to Pseudomonas syringae
2022.
Zhang, N., Hecht, C., Sun, X., Fei, Zhangjun, Martin, Gregory B.
Plant Physiol..
190
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1334–1348
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Nostoc talks back: Temporal patterns of differential gene expression during establishment of the Anthoceros-Nostoc symbiosis.
2022.
Chatterjee, P., Schafran, P., Li, Fay-Wei, Meeks, J.C.
Mol Plant Microbe Interact..
35
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917–932
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High-Throughput Evolutionary Comparative Analysis of Long Intergenic Noncoding RNAs in Multiple Organisms
2022.
Nelson Dittrich, A.C., Nelson, Andrew D.L.
Methods Mol Biol..
2512
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45–60
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Laser capture of tomato pericarp tissues for microscale carotenoid analysis by supercritical fluid chromatography.
2022.
Ramsey, J.S., Fish, T.L., Thannhauser, T.W., Giovannoni, James J.
Methods Enzymol..
670
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213–233
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Systematics and Plastome Evolution in Schizaeaceae.
2022.
Ke, B.F., Wang, G.J., Labiak, P.H., Rouhan, G., Chen, C.W., Shepherd, L.D., Ohlsen, D.J., Renner, M.A.M., Karol, K.G., Li, Fay-Wei, Kuo, L.Y.
Front Plant Sci..
13
:
885501
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AIG2A and AIG2B limit the activation of salicylic acid-regulated defenses by tryptophan-derived secondary metabolism in Arabidopsis.
2022.
Wang, Z., Yang, L., Jander, Georg, Bhawal, R., Zhang, S., Liu, Z., Oakley, A., Hua, J.
Plant Cell.
34
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4641–4660
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Distinct ankyrin repeat subdomains control VAPYRIN locations and intracellular accommodation functions during arbuscular mycorrhizal symbiosis.
2022.
Lindsay, P.L., Ivanov, S., Pumplin, N., Zhang, X., Harrison, Maria J.
Nat Commun..
13
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5228
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Selection pressure on the rhizosphere microbiome can alter nitrogen use efficiency and seed yield in Brassica rapa
2022.
Garcia, J., Gannett, M., Wei, L., Cheng, L., Hu, S., Sparks, J., Giovannoni, James J., Kao-Kniffin, J.
Commun Biol..
5
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959
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OPDA, more than just a jasmonate precursor.
2022.
Jimenez Aleman, G.H., Thirumalaikumar, V.P., Jander, Georg, Fernie, A.R., Skirycz, Aleksandra
Phytochemistry.
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Dynamic genome evolution in a model fern.
2022.
Marchant, D.B., Chen, G., Cai, S., Chen, F., Schafran, P., Jenkins, J., Shu, S., Plott, C., Webber, J., Lovell, J.T., He, G., Sandor, L., Williams, M., Rajasekar, S., Healey, A., Barry, K., Zhang, Y., Sessa, E., Dhakal, R.R., Wolf, P.G., Harkess, A., Li, Fay-Wei, Rössner, C., Becker, A., Gramzow, L., Xue, D., Wu, Y., Tong, T., Wang, Y., Dai, F., Hua, S., Wang, H., Xu, S., Xu, F., Duan, H., Theißen, G., McKain, M.R., Li, Z., McKibben, M.T.W., Barker, M.S., Schmitz, R.J., Stevenson, D.W., Zumajo-Cardona, C., Ambrose, B.A., Leebens-Mack, J.H., Grimwood, J., Schmutz, J., Soltis, P.S., Soltis, D.E., Chen, Z.H.
Nat Plants..
8
:
1038–1051
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Spatiotemporal dynamics of the tomato fruit transcriptome under prolonged water stress.
2022.
Nicolas, P., Shinozaki, Y., Powell, A., Philippe, G., Snyder, S.I., Bao, K., Zheng, Y., Xu, Y., Courtney, L., Vrebalov, J., Casteel, C.L., Mueller, Lukas A., Fei, Zhangjun, Giovannoni, James J., Rose, J.K.C., Catalá, Carmen
Plant Physiol..
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Rapid growth of Moso bamboo (Phyllostachys edulis): Cellular roadmaps, transcriptome dynamics, and environmental factors
2022.
Chen, M., Guo, L., Ramakrishnan, M., Fei, Zhangjun., Vinod, K.K., Ding, Y., Jiao, C., Gao, Z., Zha, R., Wang, C., Gao, Z., Yu, F., Ren, G., Wei, Q.
The Plant Cell.
34
:
3577–3610
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Cellular differentiation, hormonal gradient, and molecular alternation between the division zone and the elongation zone of bamboo internodes
2022.
Guo, L., Wang, C., Chen, J., Ju, Y., Yu, F., Jiao, C., Fei, Zhangjun, Ding, Y., Wei, Q.
Physiologia Plantarum.
174
:
e13744
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An apple somatic mutation of delayed fruit maturation date is primarily caused by a retrotransposon insertion-associated large deletion
2022.
Ban, S., El-Sharkawy, I., Zhao, J., Fei, Zhangjun, Xu, K.
The Plant Journal.
111
:
1609–1625
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Copper starvation induces antimicrobial isocyanide integrated into two distinct biosynthetic pathways in fungi
2022.
Won, T.H., Bok, J.W., Nadig, N., Venkatesh, N., Nickle,s G., Grecom C., Lim, F.Y., González, J.B., Turgeon, B.G., Keller, N.P., Schroeder, Frank
Nature Communications.
13(1)
:
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Genome Sequencing of up to 6,000-Year-Old Citrullus Seeds Reveals Use of a Bitter-Fleshed Species Prior to Watermelon Domestication
2022.
Pérez-Escobar, O.A., Tusso, S., Przelomska, N.A.S., Wu, S., Ryan, P., Nesbitt, M., Silber, M.V., Preick, M., Fei, Zhangjun, Hofreiter, M., Chomicki, G., Renner, S.S.
Molecular Biology and Evolution.
39
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Long-Term Lacticaseibacillus rhamnosus GG Storage at Ambient Temperature in Vegetable Oil: Viability and Functional Assessments
2022.
Davachi, S.M., Dogan, B., Khazdooz, L., Zhang, S., Khojastegi, A., Fei, Zhangjun, Sun, H., Meletharayil, G., Kapoor, R., Simpson, K.W., Abbaspourrad, A.
Journal of Agricultural and Food Chemistry.
70
:
9399–9411
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C. elegans as a model for inter-individual variation in metabolism
2022.
Fox, B.W., Ponomarova, O., Lee, Y.U., Zhang, G., Giese, G.E., Walker, M., Roberto, N.M., Na, H., Rodrigues, P.R., Curtis, B.J., Kolodziej, A.R., Crombie, T.A., Zdraljevic, S., Yilmaz, L.S., Andersen, E.C., Schroeder, Frank, Walhout, A.J.M.
Nature.
607
:
571–577
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The diversity of quinoa morphological traits and seed metabolic composition
2022.
Tabatabaei, I., Alseekh, S., Shahid, M., Leniak, E., Wagner, M., Mahmoudi, H., Thushar, S., Fernie, A.R., Murphy, K.M., Schmöckel, S.M., Tester, M., Mueller-Roeber, B., Skirycz, Aleksandra, Balazadeh, S.
Sci Data.
9
:
323
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A Conserved Long Intergenic Non-coding RNA Containing snoRNA Sequences, lncCOBRA1, Affects Arabidopsis Germination and Development.
2022.
Kramer, M.C., Kim, H.J., Palos, K.R., Garcia, B.A., Lyons, E., Beilstein, M.A., Nelson, Andrew D.L., Gregory, B.D.
Front Plant Sci..
13
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The emerging role of PP2C phosphatases in tomato immunity.
2022.
Sobol, G., Chakraborty, J., Martin, Gregory B., Sessa, G.
Mol Plant Microbe Interact..
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Chromosome-scale genome assemblies of wild tomato relatives Solanum habrochaites and Solanum galapagense reveal structural variants associated with stress tolerance and terpene biosynthesis
2022.
Yu, X., Qu, M., Shi, Y., Hao, C., Guo, S., Fei, Zhangjun, Gao, L.
Horticulture Research.
9
:
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Dynamic plastid and mitochondrial genomes in Chaetopeltidales (Chlorophyceae) and characterization of a new chlorophyte taxon.
2022.
Robison, T., Nelson, J.M., Hauser, D.A., Lewis, L.A., Li, Fay-Wei
Am J Bot..
:
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Identification and functional annotation of long intergenic non-coding RNAs in Brassicaceae.
2022.
Palos, K., Nelson Dittrich, A.C., Yu, L., Brock, J.R., Railey, C.E., Wu, H.L., Sokolowska, E., Skirycz, Aleksandra, Hsu, P.Y., Gregory, B.D., Lyons, E., Beilstein, M.A., Nelson, Andrew D.L.
Plant Cell..
:
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Current status and impending progress for cassava structural genomics.
2022.
Lyons, J.B., Bredeson, J.V., Mansfeld, B.N., Bauchet, G.J., Berry, J., Boyher, A., Mueller, Lukas A., Rokhsar, D.S., Bart, R.S.
Plant Mol Biol..
109
:
177–191
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Genome sequence for the blue-flowered Andean shrub Iochroma cyaneum reveals extensive discordance across the berry clade of Solanaceae.
2022.
Powell, A.F., Zhang, J., Hauser, D., Vilela, J.A., Hu, A., Gates, D.J., Mueller, Lukas A., Li, Fay-Wei, Strickler, S.R., Smith, S.D.
Plant Genome.
15
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e20223
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Graph pangenome captures missing heritability and empowers tomato breeding.
2022.
Zhou, Y., Zhang, Z., Bao, Z., Li, H., Lyu, Y., Zan, Y., Wu, Y., Cheng, L., Fang, Y., Wu, K., Zhang, J., Lyu, H., Lin, T., Gao, Q., Saha, S., Mueller, Lukas A., Fei, Zhangjun, Städler, T., Xu, S., Zhang, Z., Speed, D., Huang, S.
Nature.
606
:
527–534
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Chromosome-level genome assemblies of four wild peach species provide insights into genome evolution and genetic basis of stress resistance
2022.
Cao, K., Peng, Z., Zhao, X., Li, Y., Liu, K., Arus, P., Fang, W., Chen, C., Wang, X., Wu, J., Fei, Zhangjun , Wang, L.
BMC Biology.
20(1)
:
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Genomic insights into the origin, adaptive evolution, and herbicide resistance of Leptochloa chinensis, a devastating tetraploid weedy grass in rice fields
2022.
Wang, L., Sun, X., Peng, Y., Chen, K., Wu, S., Guo, Y., Zhang, J., Yang, H., Jin, T., Wu, L., Zhou, X., Liang, B., Zhao, Z., Liu, D., Fei, Zhangjun, Bai, L.
15
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1045–1058
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Combined nature and human selections reshaped peach fruit metabolome
2022.
Cao, K., Wang, B., Fang, W., Zhu, G., Chen, C., Wang, X., Li, Y., Wu, J., Tang, T., Fei, Zhangjun, Luo, J., Wang, L.
Genome Biology.
23(1)
:
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Mucosal metabolites fuel the growth and virulence of E. coli linked to Crohn’s disease
2022.
Zhang, S., Morgan, X., Dogan, B., Martin, F.P., Strickler, S., Oka, A., Herzog, J., Liu, B., Dowd, S.E., Huttenhower, C., Pichaud, M., Dogan, E.I., Satsangi, J., Longman, R., Yantiss, R., Mueller, Lukas A., Scherl, E.J., Sartor, R.B., Simpson, K.W.
JCI Insight.
7
:
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Identification of Cellular Genes Involved in Baculovirus GP64 Trafficking to the Plasma Membrane
2022.
Hodgson, J.J., Buchon, N., Blissard, Gary W.
J Virol..
96
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e0021522
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Dynamically expressed small RNAs, substantially driven by genomic structural variants, contribute to transcriptomic changes during tomato domestication
2022.
Qing, Y., Zheng, Y., Mlotshwa, S., Smith, H.N., Wang, X., Zhai, X., van der Knaap, E., Wang, Y., Fei, Zhangjun
The Plant Journal.
110
:
1536–1550
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Insects Co-opt Host Genes to Overcome Plant Defences
2022.
Edwards, O., Jander, Georg, Ochman, H., Schuurink, R., Singh, K.B.
Fac Rev..
11
:
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The tomato yellow leaf curl virus C4 protein alters the expression of plant developmental genes correlating to leaf upward cupping phenotype in tomato.
2022.
Padmanabhan, C., Zheng, Y., Shamimuzzaman, M., Wilson, J.R., Gilliard, A., Fei, Zhangjun, Ling, K.S.
PLoS One.
17
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e0257936
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Editorial overview: Plant biotechnology
2022.
Negrão, S., Julkowska, Magdalena
Curr Opin Biotechnol. `.
10
:
102733
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The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence.
2022.
Huang, X., Wang, W., Gong, T., Wickell, D., Kuo, L.Y., Zhang, X., Wen, J., Kim, H., Lu, F., Zhao, H., Chen, S., Li, H., Wu, W., Yu, C., Chen, S., Fan, W., Chen, S., Bao, X., Li, L., Zhang, D., Jiang, L., Yan, X., Liao, Z., Zhou, G., Guo, Y., Ralph, J., Sederoff, R.R., Wei, H., Zhu, P., Li, Fay-Wei, Ming, R., Li, Q.
Nat Plants..
8
:
500–512
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A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator.
2022.
Zhu, F., Jadhav, S.S., Tohge, T., Salem, M.A., Li, J.M., Giovannoni, James J., Cheng, Y., Alseekh, S., Fernie, A.R.
Plant Physiol..
190
:
250–266
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CEST-2.2 overexpression alters lipid metabolism and extends longevity of mitochondrial mutants
2022.
Piazzesi, A., Wang, Y., Jackson, J., Wischhof, L., Zeisler-Diehl, V., Scifo, E., Oganezova, I., Hoffmann, T., Gómez, M.P., Bertan, F., Wrobel, C.J.J., Schroeder, Frank, Ehninger, D., Händler, K., Schultze, J.L., Schreiber, L., van Echten-Deckert, G., Nicotera, P., Bano, D.
EMBO Reports.
:
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Dynamic evolution of small signalling peptide compensation in plant stem cell control
2022.
Kwon, C.T., Tang, L., Wang, X., Gentile, I., Hendelman, A., Robitaille, G., Van Eck, Joyce, Xu, C., Lippman, Z.B.
Nat Plants..
8
:
346–355
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Lessons learned about the biology and genomics of Diaphorina citri infection with “Candidatus Liberibacter asiaticus” by integrating new and archived organ-specific transcriptome data
2022.
Mann, M., Saha, S., Cicero, J.M., Pitino, M., Moulton, K., Hunter, W.B., Cano, L.M., Mueller, Lukas A., Heck, M.
Gigascience.
11
:
1–16
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Characterizing Culturable Bacterial Endophytes of Five Lycopodiaceae Species
2022.
Petlewski, A.R., Patterson, A., Li, Fay-Wei
American Fern Journal.
112
:
79–92
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Genome Skimming Contributes to Clarifying Species Limits in Paris Section Axiparis (Melanthiaceae).
2022.
Ji, Y., Yang, J., Landis, J.B., Wang, S., Jin, L., Xie, P., Liu, H., Yang, J.B., Yi, T.S.
Front Plant Sci..
13
:
832034
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A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity.
2022.
Powell, A.F., Feder, A., Li, J., Schmidt, M.H., Courtney, L., Alseekh, S., Jobson, E.M., Vogel, A., Xu, Y., Lyon, D., Dumschott, K., McHale, M., Sulpice, R., Bao, K., Lal, R., Duhan, A., Hallab, A., Denton, A.K., Bolger, M.E., Fernie, A.R., Hind, S.R., Mueller, Lukas A., Martin, Gregory B., Fei, Zhangjun, Martin, C., Giovannoni, James J., Strickler, S.R., Usadel, B.
Plant J..
110
:
1791–1810
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Accelerating gametophytic growth in the model hornwort Anthoceros agrestis
2022.
Gunadi, A., Li, Fay-Wei, Van Eck, Joyce
Applications in Plant Sciences.
10
:
e11460
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Breedbase: a digital ecosystem for modern plant breeding.
2022.
Morales, N., Ogbonna, A.C., Ellerbrock, B.J., Bauchet, G.J., Tantikanjana, T., Tecle, I.Y., Powell, A.F., Lyon, D., Menda, N., Simoes, C.C., Saha, S., Hosmani, P., Flores, M., Panitz, N., Preble, R.S., Agbona, A., Rabbi, I., Kulakow, P., Peteti, P., Kawuki, R., Esuma, W., Kanaabi, M., Chelangat, D.M., Uba, E., Olojede, A., Onyeka, J., Shah, T., Karanja, M., Egesi, C., Tufan, H., Paterne, A., Asfaw, A., Jannink, J.L., Wolfe, M., Birkett, C.L., Waring, D.J., Hershberger, J.M., Gore, M.A., Robbins, K.R., Rife, T., Courtney, C., Poland, J., Arnaud, E., Laporte, M.A., Kulembeka, H., Salum, K., Mrema, E., Brown, A., Bayo, S., Uwimana, B., Akech, V., Yencho, C., de Boeck, B., Campos, H., Swennen, R., Edwards, J.D., Mueller, Lukas A.
G3.
12
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Past accomplishments and future challenges of the multi-omics characterization of leaf growth.
2022.
Skirycz, Aleksandra, Fernie, A.R.
Plant Physiol..
:
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Chromosome length genome assembly of the redbanded stink bug, Piezodorus guildinii (Westwood)
2022.
Saha, S, Allen, K.C., Mueller, Lukas A., Reddy, G.V.P., Perera, O.P.
BMC Res Notes..
15
:
115
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Seminars in cell and development biology on histone variants remodelers of H2A variants associated with heterochromatin
2022.
Berger, F., Muegge, K., Richards, Eric Jean
Semin Cell Dev Biol..
S1084-9521
:
00065-9
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A genetically encoded biosensor reveals spatiotemporal variation in cellular phosphate content in Brachypodium distachyon mycorrhizal roots
2022.
Zhang, S., Daniels, D.A., Ivanov, S., Jurgensen, L., Müller, L.M., Versaw, W.K., Harrison, Maria J.
New Phytologist.
:
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Regulation of Plant Primary Metabolism–How Results From Novel Technologies Are Extending Our Understanding From Classical Targeted Approaches
2022.
Skirycz, Aleksandra, Caldana, C., Fernie, A.R.
Critical Reviews in Plant Sciences.
:
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A Mathematical Framework for Analyzing Wild Tomato Root Architecture
2022.
Chandrasekhar, A., Julkowska, Magdalena
Journal of Computational Biology.
29
:
306–316
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Graph-based pan-genome reveals structural and sequence variations related to agronomic traits and domestication in cucumber
2022.
Li, H., Wang, S., Chai, S., Yang, Z., Zhang, Q., Xin, H., Xu, Y., Lin, S., Chen, X., Yao, Z., Yang, Q., Fei, Zhangjun, Huang, S., Zhang, Z.
Nature Communications.
13
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Nematode ascarosides attenuate mammalian type 2 inflammatory responses
2022.
Shinoda, K., Choe, A., Hiraharam K,, Kiuchim M,, Kokubom K,, Ichikawam T,, Hokim J,S,, Suzuki, A.S., Bose, N., Appleton, J.A., Aroian, R.V., Schroeder, Frank, Sternberg, P.W., Nakayama, T.
Proceedings of the National Academy of Sciences.
119
:
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Comparative metabolomics with Metaboseek reveals functions of a conserved fat metabolism pathway in C. elegans
2022.
Helf, M.J., Fox, B.W., Artyukhin, A.B., Zhang, Y.K., Schroeder, Frank
Nature Communications.
13
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Formation and Function of Dauer Ascarosides in the Nematodes Caenorhabditis briggsae and Caenorhabditis elegans
2022.
Cohen, S.M., Wrobel, C.J.J., Prakash, S.J., Schroeder, Frank, Sternberg, P.W.
G3: Genes, Genomes, Genetics.
12
:
jkac014
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Illuminating the lineage-specific diversification of resin glycoside acylsugars in the morning glory (Convolvulaceae) family using computational metabolomics
2022.
Kruse, L.H., Bennett, A.A., Mahood, E.H., Lazarus, E., Park, S.J., Schroeder, Frank, Moghe, G.D.
Horticulture Research.
:
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AtTIP2;2 facilitates resistance to zinc toxicity via promoting zinc immobilization in the root and limiting root-to-shoot zinc translocation in Arabidopsis thaliana
2022.
Wang, Y., Kang, Y., Yu, W., Lyi, S.M., Choi, H.W., Xiao, E., Li, L., Klessig, Daniel F., Liu, J.
Ecotoxicol Environ Saf..
233
:
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Step-by-step protocol for the isolation and transient transformation of hornwort protoplasts
2022.
Neubauer, A., Ruaud, S., Waller, M., Frangedakis, E., Li, Fay-Wei, Nötzold, S.I., Wicke, S., Bailly, A., Szövényi, P.
Applications in Plant Sciences.
10
:
e11456
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Phylogeography and population genetics reveal ring species patterns in a highly polymorphic California lily
2022.
Hernandez, A.I., Landis, J.B., Specht, C.D.
Journal of Biogeography.
:
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Phylogenomic analyses of the East Asian endemic Abelia (Caprifoliaceae) she insights into the temporal and spatial diversification history with widespread hybridization
2022.
Sun, Q.H., Morales-Briones, D.F., Wang, H.X., Landis, J.B., Wen, J., Wang, H.F.
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Migicovsky, Z., Yeats, T.H., Watts, S., Song, J., Forney, C.F., Burgher-MacLellan, K., Somers, D.J., Gong, Y., Zhang, Z., Vrebalov, J., van Velzen, R., Giovannoni, James G., Rose, J.K.C., Myles, S.
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Global patterns in genomic diversity underpinning the evolution of insecticide resistance in the aphid crop pest Myzus persicae.
2021.
Singh, K.S., Cordeiro, E.M.G., Troczka, B.J., Pym, A., Mackisack, J., Mathers, T.C., Duarte, A., Legeai, F., Robin, S., Bielza, P., Burrack, H.J., Charaabi, K., Denholm, I., Figueroa, C.C., Ffrench-Constant, R.H., Jander, Georg, Margaritopoulos, J.T., Mazzoni, E., Nauen, R., Ramírez, C.C., Ren, G., Stepanyan, I., Umina, P.A., Voronova, N.V., Vontas, J., Williamson, M.S., Wilson, A.C.C., Xi-Wu, G., Youn, Y.N., Zimmer, C.T., Simon, J.C., Hayward, A., Bass, C.
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Evolution of plant telomerase RNAs: farther to the past, deeper to the roots
2021.
Fajkus, P., Kilar, A., Nelson, Andrew D.L., Holá, M., Peška, V., Goffová, I., Fojtová, M., Zachová, D., Fulnečková, J., Fajkus, J.
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Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism
2021.
Camilo Moreno, J., Rojas, B.E., Vicente, R., Gorka, M., Matz, T., Chodasiewicz, M., Peralta-Ariza, J.S., Zhang, Y., Alseekh, S., Childs, D., Luzarowski, M., Nikoloski, Z., Zarivach, R., Walther, D., Hartman, M.D., Figueroa, C.M., Iglesias, A.A., Fernie AR, Skirycz, Aleksandra
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Affinity Purification-Mass Spectrometry Identifies a Novel Interaction between a Polerovirus and a Conserved Innate Immunity Aphid Protein that Regulates Transmission Efficiency
2021.
DeBlasio, S.L., Wilson, J.R., Tamborindeguy, C., Johnson, R.S., Pinheiro, P.V., MacCoss, M.J., Gray, S.M., Heck, Michelle L.
J Proteome Res..
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Proteomic Polyphenism in Color Morphotypes of Diaphorina citri, Insect Vector of Citrus Greening Disease
2021.
Hosseinzadeh, S., Higgins, S.A., Ramsey, J., Howe, K., Griggs, M., Castrillo, L., Heck, Michelle L.
J Proteome Res..
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Chloroplast quality control pathways are dependent on plastid DNA synthesis and nucleotides provided by cytidine triphosphate synthase two
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Alamdari, K., Fisher, K.E., Tano, D.W., Rai, S., Palos, K., Nelson, Andrew D.L., Woodson, J.D.
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Unraveling a Genetic Roadmap for Improved Taste in the Domesticated Apple
2021.
Liao, L., Zhang, W., Zhang, B., Fang, T., Wang, X.F., Cai, Y., Ogutu, C., Gao, L., Chen, G., Nie, X., Xu, J., Zhang, Q., Ren, Y., Yu, J., Wang, C., Deng, C.H., Ma, B., Zheng, B., You, C.X., Hu, D.G., Espley, R., Lin-Wang, K., Yao, J.L., Allan, A.C., Khan, A., Korban, S.S., Fei, Zhangjun, Ming, R., Hao, Y.J., Li, L., Han, Y.
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A chromosome-level genome of a Kordofan melon illuminates the origin of domesticated watermelons
2021.
Renner, S.S., Wu, S., Perez-Escobar, O.A., Silber, M.V., Fei, Zhangjun, Chomicki, G.
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Transcriptional Response to a Dauer-Inducing Ascaroside Cocktail in Late L1 in C. elegans
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Cohen, S.M., Sun, J.J., Schroeder, Frank
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Nematode Signaling Molecules Are Extensively Metabolized by Animals, Plants, and Microorganisms
2021.
Yu, Y., Zhang, Y.K., Manohar, M., Artyukhin, A.B., Kumari, A., Tenjo-Castano, F.J., Nguyen, H., Routray, P., Choe, A., Klessig, Daniel F., Schroeder, Frank
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PIF4 negatively modulates cold tolerance in tomato anthers via temperature-dependent regulation of tapetal cell death
2021.
Pan, C., Yang, D., Zhao, X., Liu, Y., Li, M., Ye, L., Ali, M., Yu, F., Lamin-Samu, A.T., Fei, Zhangjun, Lu, G.
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Genetic mapping of the early responses to salt stress in Arabidopsis thaliana
2021.
Awlia, M., Alshareef, N., Saber, N., Korte, A., Oakey, H., Panzarova, K., Trtilek, M., Negrao, S., Tester, M., Julkowska, Magdalena
Plant J..
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Genome sequencing sheds light on the contribution of structural variants to Brassica oleracea diversification
2021.
Guo, N., Wang, S., Gao, L., Liu, Y., Wang, X., Lai, E., Duan, M., Wang, G., Li, J., Yang, M., Zong, M., Han, S., Pei, Y., Borm, T., Sun, H., Miao, L., Liu, D., Yu, F., Zhang, W., Ji, H., Zhu, C., Xu, Y., Bonnema, G., Li, J., Fei, Zhangjun, Liu, F.
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Rubisco production in maize mesophyll cells through ectopic expression of subunits and chaperones
2021.
Hotto, A.M., Salesse-Smith, C., Lin, Y., Busch, F.A., Simpson, I., Stern, David
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Comparative transcriptome profiling of Chinese wild grapes provides insights into powdery mildew resistance
2021.
Jiao, C., Sun, X., Yan, X., Xu, X., Yan, Q., Gao, M., Fei, Zhangjun, Wang, X.
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Engineering insect resistance using plant specialized metabolites.
2021.
Zhou, S., Jander, Georg
Curr Opin Biotechnol..
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The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago
2021.
Raharimalala, N., Rombauts, S., McCarthy, A., Garavito, A., Orozco-Arias, S., Bellanger, L., Morales-Correa, A.Y., Froger, S., Michaux, S., Berry, V., Metairon, S., Fournier, C., Lepelley, M., Mueller, Lukas, A., Couturon, E., Hamon, P., Rakotomalala, J.J., Descombes, P., Guyot, R., Crouzillat, D.
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Charting the genomic landscape of seed-free plants
2021.
Szövényi, P., Gunadi, A., Li, Fay-Wei
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Prey sensing and response in a nematode-trapping fungus is governed by the MAPK pheromone response pathway
2021.
Chen, S.A., Lin, H.C., Schroeder, Frank, Hsueh, Y.P.
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Functional characterization of proton antiport regulation in the thylakoid membrane
2021.
Uflewski, M., Mielke, S., Galvis, V.C., von Bismarck, T., Chen, X., Tietz, E., Ruß, J., Luzarowski, M., Sokolowska, E., Skirycz, Aleksandra, Eirich, J., Finkemeier, I., Schöttler, M.A., Armbruster, U.
Plant Physiol..
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Genetic mapping identifies a rice naringenin O-glucosyltransferase that influences insect resistance
2021.
Yang, Z., Li, N., Kitano, T., Li, P., Spindel, J.E., Wang, L., Bai, G., Xiao, Y., McCouch, S.R., Ishihara, A., Zhang, J., Yang, X., Chen, Z., Wei, J., Ge, H., Jander, Georg, Yan, J.
Plant J..
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A sugarcane mosaic virus vector for rapid in planta screening of proteins that inhibit the growth of insect herbivores
2021.
Chung, S.H., Bigham, M., Lappe, R.R., Chan, B., Nagalakshmi, U., Whitham, S.A., Dinesh-Kumar, S.P., Jander, Georg
Plant Biotechnol J..
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Ethylene-regulated asymmetric growth of the petal base promotes flower opening in rose (Rosa hybrida)
2021.
Cheng, C., Yu, Q., Wang, Y., Wang, H., Dong, Y., Ji, Y., Zhou, X., Li, Y., Jiang, C.Z., Gan, S.S., Zhao, L., Fei, Zhangjun, Gao, J., Ma, N.
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Genomic analyses provide insights into peach local adaptation and responses to climate change
2021.
Li, Y., Cao, K, Li, N., Zhu, G., Fang, Q., Chen, C., Wang, X., Guo, J., Wang, Q., Wang J., Guan, L., Wang, J., Liu, K., Guo, W., Arus, P., Huang, S., Fei, Zhangjun, Wang, L.
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Syntheses of Amorfrutins and Derivatives via Tandem Diels-Alder and Anionic Cascade Approaches
2021.
Curtis, B.J., Micikas, R.J., Burkhardt, R.N., Smith, R.A., Pan, J.Y., Jander, K., Schroeder, Frank
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Engineering pest tolerance through plant-mediated RNA interference.
2021.
Chung, S.H., Feng, H., Jander, Georg
Curr Opin Plant Biol..
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Conserved and reproducible bacterial communities associate with extraradical hyphae of arbuscular mycorrhizal fungi.
2021.
Emmett, B.D., Lévesque-Tremblay, V., Harrison, Maria J.
ISME J..
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The ‘Tommy Atkins’ mango genome reveals candidate genes for fruit quality
2021.
Mango Genome Consortium, Bally, I.S.E., Bombarely, A., Chambers, A.H., Cohen, Y., Dillon, N.L., Innes, D.J., Islas-Osuna, M.A., Kuhn, D.N., Mueller, Lukas A., Ophir, R., Rambani, A., Sherman, A., Yan, H.
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A Multi-OMICs Approach Sheds Light on the Higher Yield Phenotype and Enhanced Abiotic Stress Tolerance in Tobacco Lines Expressing the Carrot lycopene β-cyclase1 Gene
2021.
Moreno, J.C., Martinez-Jaime, S., Kosmacz, M., Sokolowska, E.M., Schulz, P., Fischer, A., Luzarowska, U., Havaux, M., Skirycz, Aleksandra
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The NAC transcription factor FaRIF controls fruit ripening in strawberry
2021.
Martín-Pizarro, C., Vallarino, J.G., Osorio, S., Meco, V., Urrutia, M., Pillet, J., Casañal, A., Merchante, C., Amaya, I., Willmitzer, L., Fernie, A.R., Giovannoni, James J., Botella, M.A., Valpuesta, V., Posé, D.
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EDC3 phosphorylation regulates growth and invasion through controlling P-body formation and dynamics
2021.
Bearss, J.J., Padi, S.K., Singh, N., Cardo-Vila, M., Song, J.H., Mouneimne, G., Fernandes, N., Li, Y., Harter, M.R., Gard, J.M., Cress, A.E., Peti, W., Nelson, Andrew D.L., Buchan, J.R., Kraft, A.S., Okumura, K.
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Genome-wide association studies provide insights into the genetic determination of fruit traits of pear
2021.
Zhang, M.Y., Cheng, X., Hu, H., Li, J., Xue, Y., Wang, R., Fan, J., Zou, C., Tao, S., Qin, M., Bai, B., Li, X., Gu, C., Wu, C., Yang, G., Chen, X., Liu, Y., Sun, M., Fei, Zhangjun, Zhang, S., Wu, J.
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Current status and impending progress for cassava structural genomics
2021.
Lyons, J.B., Bredeson, J.V., Mansfeld, B.N., Bauchet, G.J., Berry, J., Boyher, A., Mueller, Lukas A., Rokhsar, D.S., Bart, R.S.
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Dual-purpose isocyanides produced by Aspergillus fumigatus contribute to cellular copper sufficiency and exhibit antimicrobial activity
2021.
Raffa, N., Won, T.H., Sukowaty, A., Candor, K., Cui, C., Halder, S., Dai, M., Landero-Figueroa, J.A., Schroeder, Frank, Keller, N.P.
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The role of PQL genes in response to salinity tolerance in Arabidopsis and barley
2021.
Alqahtani, M., Lightfoot, D., Lemtiri‐Chlieh, F., Bukhari, E., Pardo, M., Julkowska, Magdalena, Tester, M.
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Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity
2021.
Luzarowski, M., Vicente, R., Kiselev, A., Wagner, M., Schlossarek, D., Erban, A., de Souza, L.P., Childs, D., Wojciechowska, I., Luzarowska, U., Górka, M., Sokołowska, E.M., Kosmacz, M., Moreno, J.C., Brzezińska, A., Vegesna, B., Kopka, J., Fernie, A.R., Willmitzer, L., Ewald, J.C., Skirycz, Aleksandra
Communications Biology.
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Interaction of eukaryotic proliferating cell nuclear antigen (PCNA) with the replication-associated protein (Rep) of cotton leaf curl Multan virus and pedilanthus leaf curl virus.
2021.
Shakir, S., Jander, Georg, Nahid, N., Mubin, M., Younus, A., Nawaz-Ul-Rehman, M.S.
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Transcriptome analysis provides insights into the responses of sweet potato to sweet potato virus disease (SPVD)
2021.
Bednarek, R., David, M., Fuentes, S., Kreuze, J., Fei, Zhangjun
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Large-scale GWAS using historical data identifies a conserved genetic architecture of cyanogenic glucosides content in cassava (Manihot esculenta Crantz.) root
2021.
Ogbonna, A.C., Braatz de Andrade, L.R., Rabbi, I.Y., Mueller, Lukas A., de Oliverira, E.J., Bauchet, G.J.
Plant J..
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The Hornworts: Morphology, evolution and development
2021.
Frangedakis, E., Shimamura, M., Villarreal, J.C., Li, Fay-Wei, Tomaselli, M., Waller, M., Sakakibara, K., Renzaglia, K.S., Szövényi, P.
New Phytol..
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Natural variation in the expression and catalytic activity of a naringenin 7-O-methyltransferase influences antifungal defenses in diverse rice cultivars
2020.
Murata, K., Kitano, T., Yoshimoto, R., Takata, R., Ube, N., Ueno, K., Ueno, M., Yabuta, Y., Teraishi, M., Holland, C.K., Jander, Georg, Okumoto, Y., Mori, N., Ishihara, A.
Plant J..
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Less Is More: a Mutation in the Chemical Defense Pathway of Erysimum cheiranthoides (Brassicaceae) Reduces Total Cardenolide Abundance but Increases Resistance to Insect Herbivores
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Mirzaei, M., Züst, T., Younkin, G.C., Hastings, A.P., Alani, M.L., Agrawal, A.A., Jander, Georg
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VIEWPOINT: Five recommendations for an inclusive and collaborative One CGIAR
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Coffman, RC., Acevedom M., Evanega, Sarah, Porciello, J., Tufan, HA., McCandless, L.
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Bacterial Vector-Borne Plant Diseases: Unanswered Questions and Future Directions
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Huang, W., Reyes-Caldas, P., Mann, M., Seifbarghi, S., Kahn, A., Almeida, R.P.P., Béven, L., Heck, Michelle L., Hogenhout, S.A., Coaker, G.
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Endomembrane architecture and dynamics during secretion of the extracellular matrix of the unicellular charophyte, Penium margaritaceum
2020.
Domozych, D.S., Sun, L., Palacio-Lopez, K., Reed, R., Jeon, S., Li, M., Jiao, C., Sorensen, I., Fei, Zhangjun, Rose, J.K.C.
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A key ‘foxy’ aroma gene is regulated by homology-induced promoter indels in the iconic juice grape ‘Concord’
2020.
Yang, Y., Cuenca, J., Wang, N., Liang, Z., Sun, H., Gutierrez, B., Xi, X., Arro, J., Wang, Y., Fan, P., Londo, J., Cousins, P., Li, S., Fei, Z., Zhong, G.Y.
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Small But Powerful: MicroRNA-Derived Peptides Promote Grape Adventitious Root Formation
2020.
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Extreme Engineering: How Antarctic Algae Adapt to Hypersalinity
2020.
Julkowska, Magdalena
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Auxin Regulates Sucrose Transport to Repress Petal Abscission in Rose (Rosa hybrida)
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Liang, Y., Jiang, C., Liu, Y., Gao, Y., Lu, J., Aiwaili, P., Fei, Zhangjun, Jiang, C.Z., Hong, B., Ma, C., Gao, J.
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Comparison of in Vitro and in Planta Toxicity of Vip3A for Lepidopteran Herbivores
2020.
Khan, M.H., Jander, Georg, Mukhtar, Z., Arshad, M., Sarwar, M., Asad, S.
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Coordination of NMCP1- and NMCP2-class proteins within the plant nucleoskeleton
2020.
Blunt, E., Shandler, J., Hughes, E., Sussman, H., Christopherson, R., Richards, Eric Jean
Molecular Biology of the Cell.
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Tomato fruit as a model for tissue-specific gene silencing in crop plants
2020.
Feder, A., Jensen, S., Wang, A., Courtney, L., Middleton, L., Van Eck, Joyce, Liu, Y., Giovannoni, James J.
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Arabidopsis ADC1 functions as an Nδ -acetylornithine decarboxylase.
2020.
Lou, Y.R., Ahmed, S., Yan, J., Adio, A.M., Powell, H.M., Morris, P.F., Jander, Georg
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
2020.
Fernandez-Pozo, N., Haas, F.B., Meyberg, R., Ullrich, K.K., Hiss, M., Perroud, P.F., Hanke, S., Kratz, V., Powell, A.F., Vesty, E.F., Daum, C.G., Zane, M., Lipzen, A., Sreedasyam, A., Grimwood, J., Coates, J.C., Barry, K., Schmutz, J., Mueller, Lukas A., Rensing, S.A.
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Diverse Traits Contribute to Salinity Tolerance of Wild Tomato Seedlings from the Galapagos Islands
2020.
Pailles, Y., Awlia, M., Julkowska, Magdalena, Passone, L., Zemmouri, K., Negrao, S., Schmockel, S.M., Tester, M.
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